Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SNX4O95219 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX4O95219 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
SNX4O95219 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
SNX4O95219 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.34□□□□□ -0.11
SNX4O95219 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
SNX4O95219 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.34□□□□□ -0.11
SNX4O95219 MYCLP2-201ENST00000449268 967 ntBASIC14.34□□□□□ -0.11
SNX4O95219 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 KRT18P43-201ENST00000469825 1281 ntBASIC14.34□□□□□ -0.11
SNX4O95219 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.34□□□□□ -0.11
SNX4O95219 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 AL391069.4-201ENST00000609583 481 ntBASIC14.34□□□□□ -0.11
SNX4O95219 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 AC007431.3-201ENST00000623221 587 ntBASIC14.34□□□□□ -0.11
SNX4O95219 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
SNX4O95219 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SNX4O95219 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SNX4O95219 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SNX4O95219 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNX4O95219 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 FGD5P1-202ENST00000614866 2498 ntBASIC14.33□□□□□ -0.12
SNX4O95219 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 KRT18P64-201ENST00000434946 1219 ntBASIC14.33□□□□□ -0.12
SNX4O95219 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 RPL13AP25-201ENST00000484130 612 ntBASIC14.33□□□□□ -0.12
SNX4O95219 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.33□□□□□ -0.12
SNX4O95219 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.33□□□□□ -0.12
SNX4O95219 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.33□□□□□ -0.12
SNX4O95219 TMEM261P1-201ENST00000604899 340 ntBASIC14.33□□□□□ -0.12
SNX4O95219 AC008494.3-201ENST00000606615 944 ntBASIC14.33□□□□□ -0.12
SNX4O95219 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.33□□□□□ -0.12
SNX4O95219 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNX4O95219 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNX4O95219 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms