Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.04□□□□□ -0.16
IDH3BO43837 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.04□□□□□ -0.16
IDH3BO43837 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IDH3BO43837 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
IDH3BO43837 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 DMBT1P1-203ENST00000636837 4628 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FGD5P1-202ENST00000614866 2498 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 FAM58DP-201ENST00000428076 619 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 TARDBPP1-201ENST00000442013 1203 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.03□□□□□ -0.16
IDH3BO43837 AP000344.2-201ENST00000512987 629 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
IDH3BO43837 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.03□□□□□ -0.16
IDH3BO43837 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.03□□□□□ -0.16
IDH3BO43837 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.03□□□□□ -0.16
IDH3BO43837 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.03□□□□□ -0.16
IDH3BO43837 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AC136759.1-202ENST00000530858 2194 ntBASIC14.03□□□□□ -0.16
IDH3BO43837 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.03□□□□□ -0.16
IDH3BO43837 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
IDH3BO43837 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IDH3BO43837 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.02□□□□□ -0.16
IDH3BO43837 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.02□□□□□ -0.16
IDH3BO43837 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
IDH3BO43837 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
IDH3BO43837 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
IDH3BO43837 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.02□□□□□ -0.16
IDH3BO43837 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IDH3BO43837 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms