Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.63□□□□□ -0.23
LAMA5O15230 AL360270.3-201ENST00000609118 1348 ntBASIC13.63□□□□□ -0.23
LAMA5O15230 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.63□□□□□ -0.23
LAMA5O15230 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.63□□□□□ -0.23
LAMA5O15230 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.63□□□□□ -0.23
LAMA5O15230 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.63□□□□□ -0.23
LAMA5O15230 MIR6720-201ENST00000611664 98 ntBASIC13.63□□□□□ -0.23
LAMA5O15230 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LAMA5O15230 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 TMBIM7P-202ENST00000641474 1516 ntBASIC13.63□□□□□ -0.23
LAMA5O15230 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.63□□□□□ -0.23
LAMA5O15230 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LAMA5O15230 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 RNA5SP359-201ENST00000364838 113 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.62□□□□□ -0.23
LAMA5O15230 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.62□□□□□ -0.23
LAMA5O15230 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 AC004466.2-201ENST00000614749 516 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.62□□□□□ -0.23
LAMA5O15230 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.62□□□□□ -0.23
LAMA5O15230 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.62□□□□□ -0.23
LAMA5O15230 AL160191.2-201ENST00000603975 601 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 RPL3P5-201ENST00000441645 1232 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 AC133540.1-201ENST00000620845 1019 ntBASIC13.62□□□□□ -0.23
LAMA5O15230 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LAMA5O15230 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LAMA5O15230 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.62□□□□□ -0.23
LAMA5O15230 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.61□□□□□ -0.23
LAMA5O15230 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LAMA5O15230 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.61□□□□□ -0.23
LAMA5O15230 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.61□□□□□ -0.23
LAMA5O15230 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LAMA5O15230 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.61□□□□□ -0.23
LAMA5O15230 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.61□□□□□ -0.23
LAMA5O15230 HERC2P11-201ENST00000562845 725 ntBASIC13.61□□□□□ -0.23
LAMA5O15230 AC100756.2-201ENST00000569537 736 ntBASIC13.61□□□□□ -0.23
LAMA5O15230 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LAMA5O15230 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.61□□□□□ -0.23
LAMA5O15230 AC110057.1-201ENST00000636031 898 ntBASIC13.61□□□□□ -0.23
LAMA5O15230 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LAMA5O15230 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LAMA5O15230 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LAMA5O15230 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.61□□□□□ -0.23
LAMA5O15230 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms