Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CHCHD2P3-201ENST00000603038 451 ntBASIC14.89□□□□□ -0.03
CDC7O00311 AJ011932.1-201ENST00000621707 465 ntBASIC14.89□□□□□ -0.03
CDC7O00311 AC007431.3-201ENST00000623221 587 ntBASIC14.89□□□□□ -0.03
CDC7O00311 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.89□□□□□ -0.03
CDC7O00311 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.89□□□□□ -0.03
CDC7O00311 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDC7O00311 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
CDC7O00311 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC7O00311 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC7O00311 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CDC7O00311 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC7O00311 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC7O00311 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDC7O00311 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 AC113367.3-201ENST00000508316 1912 ntBASIC14.88□□□□□ -0.03
CDC7O00311 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC7O00311 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 AC092552.1-201ENST00000547243 906 ntBASIC14.88□□□□□ -0.03
CDC7O00311 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC7O00311 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CDC7O00311 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC7O00311 AC008761.3-201ENST00000624803 892 ntBASIC14.88□□□□□ -0.03
CDC7O00311 PRSS30P-206ENST00000641773 873 ntBASIC14.88□□□□□ -0.03
CDC7O00311 OR2I1P-210ENST00000642037 4691 ntBASIC14.88□□□□□ -0.03
CDC7O00311 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.88□□□□□ -0.03
CDC7O00311 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.88□□□□□ -0.03
CDC7O00311 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDC7O00311 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.88□□□□□ -0.03
CDC7O00311 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 AP001267.2-201ENST00000532619 2086 ntBASIC14.88□□□□□ -0.03
CDC7O00311 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDC7O00311 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.87□□□□□ -0.03
CDC7O00311 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.87□□□□□ -0.03
CDC7O00311 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 KRT8P22-201ENST00000562317 1415 ntBASIC14.87□□□□□ -0.03
CDC7O00311 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CDC7O00311 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 RNU1-114P-201ENST00000365297 166 ntBASIC14.87□□□□□ -0.03
CDC7O00311 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.87□□□□□ -0.03
CDC7O00311 AL442647.2-201ENST00000429864 857 ntBASIC14.87□□□□□ -0.03
CDC7O00311 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDC7O00311 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.87□□□□□ -0.03
CDC7O00311 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDC7O00311 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms