Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 RN7SL81P-201ENST00000493781 261 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 CMC2-224ENST00000630396 481 ntTSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PLEKHD1A6NEE1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 AHCYP4-201ENST00000419201 1315 ntBASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 MRPL22P1-201ENST00000505398 616 ntBASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 MVK-217ENST00000639206 367 ntTSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PLEKHD1A6NEE1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 AC003686.1-201ENST00000550956 1034 ntBASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 AC105137.3-201ENST00000617588 984 ntBASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 AC005618.3-201ENST00000624928 458 ntBASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PLEKHD1A6NEE1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 REXO1L2P-201ENST00000425429 2069 ntBASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 AL157792.1-201ENST00000488281 530 ntBASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 AC141586.1-203ENST00000567242 366 ntBASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PLEKHD1A6NEE1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PLEKHD1A6NEE1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms