Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KLHL9Q9P2J3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AC134915.1-201ENST00000426461 574 ntBASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ELK1P1-201ENST00000485699 580 ntBASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AC133539.2-201ENST00000604757 467 ntBASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AC084364.1-201ENST00000551967 1556 ntBASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 INTS4P2-202ENST00000614726 2019 ntBASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
KLHL9Q9P2J3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
KLHL9Q9P2J3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms