Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 CNN2P10-201ENST00000443067 918 ntBASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 FAM86HP-204ENST00000513466 959 ntBASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 REXO1L2P-201ENST00000425429 2069 ntBASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.4■□□□□ 0.54
HMG20BQ9P0W2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HMG20BQ9P0W2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HMG20BQ9P0W2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
HMG20BQ9P0W2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 FAM8A4P-201ENST00000435433 1213 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 GOLGA2P4-201ENST00000441462 777 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AC108725.1-201ENST00000495472 409 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL391280.1-201ENST00000506969 1062 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 LINC01101-201ENST00000622953 1884 ntBASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.39■□□□□ 0.53
HMG20BQ9P0W2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 LINC00528-201ENST00000600723 2160 ntBASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 AC106820.3-201ENST00000561653 397 ntBASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 AP006547.1-201ENST00000563435 692 ntBASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HMG20BQ9P0W2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms