Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 TSPY16P-201ENST00000449843 468 ntBASIC14.5□□□□□ -0.09
BRF2Q9HAW0 AP001582.1-201ENST00000525856 295 ntBASIC14.5□□□□□ -0.09
BRF2Q9HAW0 ENPP7P5-201ENST00000541031 1031 ntBASIC14.5□□□□□ -0.09
BRF2Q9HAW0 AC004233.3-201ENST00000607794 1269 ntBASIC14.5□□□□□ -0.09
BRF2Q9HAW0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 AC007541.1-201ENST00000570282 1469 ntBASIC14.5□□□□□ -0.09
BRF2Q9HAW0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BRF2Q9HAW0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AC007686.3-201ENST00000619017 3487 ntBASIC14.49□□□□□ -0.09
BRF2Q9HAW0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 RNU1-114P-201ENST00000365297 166 ntBASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AC027796.2-201ENST00000575326 344 ntBASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AP005019.2-201ENST00000615104 511 ntBASIC14.49□□□□□ -0.09
BRF2Q9HAW0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
BRF2Q9HAW0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms