Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL589826.1-201ENST00000340697 249 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL590240.2-201ENST00000413370 894 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 USP40-206ENST00000443711 628 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 IGHV3-62-201ENST00000520057 340 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 OR4A48P-201ENST00000531359 391 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AL645728.2-202ENST00000641679 227 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 AC005252.3-201ENST00000623855 2258 ntBASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
KRTAP3-1Q9BYR8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 IL9RP2-201ENST00000423948 1312 ntBASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 IMPDH1P4-201ENST00000445028 1534 ntBASIC7.79□□□□□ -1.16
KRTAP3-1Q9BYR8 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms