Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ACTBP8-201ENST00000403258 1108 ntBASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 SNX29P1-201ENST00000548357 1007 ntBASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP3Q9BWW4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 AC022532.1-201ENST00000624563 1728 ntBASIC12.71□□□□□ -0.38
SSBP3Q9BWW4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AL158070.2-201ENST00000623713 1621 ntBASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 RPL7P3-201ENST00000441388 714 ntBASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MYO15B-237ENST00000642007 4893 ntBASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 AC020658.6-201ENST00000623564 1870 ntBASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SSBP3Q9BWW4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms