Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.58□□□□□ -0.56
VGLL1Q99990 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.58□□□□□ -0.56
VGLL1Q99990 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.58□□□□□ -0.56
VGLL1Q99990 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 AL133267.1-201ENST00000398220 340 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.57□□□□□ -0.56
VGLL1Q99990 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.57□□□□□ -0.56
VGLL1Q99990 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.57□□□□□ -0.56
VGLL1Q99990 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 AC025181.2-201ENST00000606994 802 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 AL589739.1-201ENST00000607720 493 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 MIR6069-201ENST00000620069 79 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 AF228730.6-201ENST00000641497 218 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 AC084121.3-201ENST00000641716 218 ntBASIC11.57□□□□□ -0.56
VGLL1Q99990 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.57□□□□□ -0.56
VGLL1Q99990 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VGLL1Q99990 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VGLL1Q99990 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms