Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC009779.7-201ENST00000609031 469 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SLC9A7P1-202ENST00000556476 2239 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RN7SKP212-201ENST00000410851 328 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 YY1P2-201ENST00000438766 948 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 HNRNPA1P69-201ENST00000552536 933 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KRT8P2-201ENST00000556193 944 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CDIPT-AS1-203ENST00000638164 713 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SRP9P1-201ENST00000445874 261 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC007622.1-201ENST00000488371 535 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RPSAP67-201ENST00000584105 862 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AL365203.3-201ENST00000609742 2057 ntBASIC4.41□□□□□ -1.7
HMCN1Q96RW7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RPS5-205ENST00000598495 800 ntTSL 3 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms