Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 RNMTL1P1-201ENST00000454103 560 ntBASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 AC091804.1-201ENST00000486888 567 ntBASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 SCARNA20.5-201ENST00000516991 142 ntBASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 AC126915.1-201ENST00000522847 1038 ntBASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC85AQ96PX6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 BX284668.4-201ENST00000453917 508 ntBASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AL358472.3-201ENST00000608147 415 ntBASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC85AQ96PX6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 AC138028.6-201ENST00000616106 1482 ntBASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 FLJ16779-201ENST00000612722 7638 ntBASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 AL136309.1-201ENST00000403917 691 ntBASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC85AQ96PX6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms