Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAB11FIP4Q86YS3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB11FIP4Q86YS3 AC126755.1-201ENST00000525846 6405 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 CICP14-201ENST00000629111 2732 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AC098614.1-201ENST00000368528 745 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AL512384.1-201ENST00000406683 331 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AC004466.1-201ENST00000599515 1080 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 AC012645.4-201ENST00000610691 1061 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 FGD5P1-202ENST00000614866 2498 ntBASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB11FIP4Q86YS3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 PCDHA3-202ENST00000532566 4594 ntBASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 AL139094.1-201ENST00000405549 1188 ntBASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 NME2P1-201ENST00000426182 414 ntBASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 EIF3FP3-201ENST00000434851 1086 ntBASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 TTTY23B-201ENST00000442790 549 ntBASIC17.79■□□□□ 0.44
RAB11FIP4Q86YS3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms