Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AP002414.2-201ENST00000591780 3365 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 NUP210P1-202ENST00000504322 710 ntBASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 RN7SL713P-201ENST00000582127 302 ntBASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AP003419.4-201ENST00000616071 517 ntBASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 AC022748.3-201ENST00000621828 275 ntBASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTC1Q2NKJ3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC020658.6-201ENST00000623564 1870 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 DPM3-202ENST00000368399 517 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AL354877.1-201ENST00000424412 413 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC069218.1-201ENST00000435269 762 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC104784.1-201ENST00000473096 294 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AC073413.1-201ENST00000603927 732 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 ZACNP1-201ENST00000612259 710 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AF254983.2-201ENST00000612331 135 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 AP000346.4-201ENST00000614827 381 ntBASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
CTC1Q2NKJ3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms