Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 AL513477.1-201ENST00000602865 2407 ntBASIC14.29□□□□□ -0.12
TRA2BP62995 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.29□□□□□ -0.12
TRA2BP62995 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.29□□□□□ -0.12
TRA2BP62995 ACTG1P3-201ENST00000431775 1114 ntBASIC14.29□□□□□ -0.12
TRA2BP62995 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 AC026434.2-201ENST00000506094 1078 ntBASIC14.29□□□□□ -0.12
TRA2BP62995 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.29□□□□□ -0.12
TRA2BP62995 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.29□□□□□ -0.12
TRA2BP62995 WASH4P-201ENST00000564273 1246 ntBASIC14.29□□□□□ -0.12
TRA2BP62995 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.29□□□□□ -0.12
TRA2BP62995 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.29□□□□□ -0.12
TRA2BP62995 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.29□□□□□ -0.12
TRA2BP62995 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.29□□□□□ -0.12
TRA2BP62995 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRA2BP62995 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRA2BP62995 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.29□□□□□ -0.12
TRA2BP62995 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRA2BP62995 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.28□□□□□ -0.12
TRA2BP62995 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TRA2BP62995 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRA2BP62995 AC098614.1-201ENST00000368528 745 ntBASIC14.28□□□□□ -0.12
TRA2BP62995 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.28□□□□□ -0.12
TRA2BP62995 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.28□□□□□ -0.12
TRA2BP62995 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRA2BP62995 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRA2BP62995 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 LINC00552-201ENST00000625151 2579 ntBASIC14.28□□□□□ -0.12
TRA2BP62995 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 AC140479.7-201ENST00000636301 2332 ntBASIC14.28□□□□□ -0.12
TRA2BP62995 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRA2BP62995 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRA2BP62995 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRA2BP62995 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRA2BP62995 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRA2BP62995 MTHFR-210ENST00000641407 2387 ntBASIC14.27□□□□□ -0.12
TRA2BP62995 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRA2BP62995 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 AC113367.3-201ENST00000508316 1912 ntBASIC14.27□□□□□ -0.12
TRA2BP62995 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRA2BP62995 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.27□□□□□ -0.12
TRA2BP62995 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.27□□□□□ -0.12
TRA2BP62995 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
TRA2BP62995 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
TRA2BP62995 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRA2BP62995 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRA2BP62995 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRA2BP62995 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms