Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK2P53671 TTTY23B-201ENST00000442790 549 ntBASIC15.32■□□□□ 0.04
LIMK2P53671 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.32■□□□□ 0.04
LIMK2P53671 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK2P53671 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 AC017083.2-201ENST00000608069 979 ntBASIC15.32■□□□□ 0.04
LIMK2P53671 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.32■□□□□ 0.04
LIMK2P53671 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.32■□□□□ 0.04
LIMK2P53671 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LIMK2P53671 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIMK2P53671 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LIMK2P53671 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LIMK2P53671 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LIMK2P53671 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.31■□□□□ 0.04
LIMK2P53671 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.31■□□□□ 0.04
LIMK2P53671 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
LIMK2P53671 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.31■□□□□ 0.04
LIMK2P53671 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.31■□□□□ 0.04
LIMK2P53671 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.31■□□□□ 0.04
LIMK2P53671 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 SAMD11P1-201ENST00000571429 661 ntBASIC15.31■□□□□ 0.04
LIMK2P53671 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
LIMK2P53671 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 WFDC1-204ENST00000613603 549 ntBASIC15.31■□□□□ 0.04
LIMK2P53671 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 CLK3P2-201ENST00000427566 1453 ntBASIC15.31■□□□□ 0.04
LIMK2P53671 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LIMK2P53671 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 MYO15B-237ENST00000642007 4893 ntBASIC15.31■□□□□ 0.04
LIMK2P53671 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.31■□□□□ 0.04
LIMK2P53671 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIMK2P53671 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
LIMK2P53671 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIMK2P53671 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms