Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.56□□□□□ -0.24
SRP9P49458 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.55□□□□□ -0.24
SRP9P49458 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 AC093214.1-201ENST00000511688 1107 ntBASIC13.55□□□□□ -0.24
SRP9P49458 RNA5SP421-201ENST00000516864 134 ntBASIC13.55□□□□□ -0.24
SRP9P49458 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
SRP9P49458 AL390754.1-201ENST00000619088 582 ntBASIC13.55□□□□□ -0.24
SRP9P49458 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SRP9P49458 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SRP9P49458 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.55□□□□□ -0.24
SRP9P49458 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SRP9P49458 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SRP9P49458 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SRP9P49458 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.54□□□□□ -0.24
SRP9P49458 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
SRP9P49458 PHKG1P2-201ENST00000457537 863 ntBASIC13.54□□□□□ -0.24
SRP9P49458 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.54□□□□□ -0.24
SRP9P49458 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms