Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 LILRP1-201ENST00000444199 1370 ntBASIC15.27■□□□□ 0.04
LSP1P33241 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LSP1P33241 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.27■□□□□ 0.04
LSP1P33241 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
LSP1P33241 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.27■□□□□ 0.04
LSP1P33241 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 AL356488.2-201ENST00000602755 427 ntBASIC15.27■□□□□ 0.04
LSP1P33241 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LSP1P33241 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LSP1P33241 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
LSP1P33241 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LSP1P33241 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LSP1P33241 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.27■□□□□ 0.03
LSP1P33241 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 AC020910.6-201ENST00000623084 1459 ntBASIC15.27■□□□□ 0.03
LSP1P33241 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LSP1P33241 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 AZGP1P1-201ENST00000411909 902 ntBASIC15.26■□□□□ 0.03
LSP1P33241 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 TPM4P1-201ENST00000436100 807 ntBASIC15.26■□□□□ 0.03
LSP1P33241 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.26■□□□□ 0.03
LSP1P33241 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.26■□□□□ 0.03
LSP1P33241 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.26■□□□□ 0.03
LSP1P33241 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LSP1P33241 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LSP1P33241 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSP1P33241 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.25■□□□□ 0.03
LSP1P33241 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSP1P33241 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSP1P33241 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.25■□□□□ 0.03
LSP1P33241 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.25■□□□□ 0.03
LSP1P33241 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LSP1P33241 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LSP1P33241 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms