Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BCL3P20749 AC018442.1-201ENST00000421439 2061 ntBASIC12.95□□□□□ -0.34
BCL3P20749 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BCL3P20749 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BCL3P20749 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.95□□□□□ -0.34
BCL3P20749 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
BCL3P20749 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BCL3P20749 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 AC005089.1-201ENST00000619486 2241 ntBASIC12.94□□□□□ -0.34
BCL3P20749 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BCL3P20749 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 MRPS18AP1-201ENST00000414458 589 ntBASIC12.94□□□□□ -0.34
BCL3P20749 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.94□□□□□ -0.34
BCL3P20749 DOC2GP-202ENST00000514950 1163 ntBASIC12.94□□□□□ -0.34
BCL3P20749 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.94□□□□□ -0.34
BCL3P20749 AC107373.2-201ENST00000607735 490 ntBASIC12.94□□□□□ -0.34
BCL3P20749 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.94□□□□□ -0.34
BCL3P20749 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.94□□□□□ -0.34
BCL3P20749 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 DRD5P1-201ENST00000456605 1438 ntBASIC12.94□□□□□ -0.34
BCL3P20749 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
BCL3P20749 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
BCL3P20749 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BCL3P20749 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.94□□□□□ -0.34
BCL3P20749 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.93□□□□□ -0.34
BCL3P20749 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.93□□□□□ -0.34
BCL3P20749 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 SPDYE19P-201ENST00000338590 713 ntBASIC12.93□□□□□ -0.34
BCL3P20749 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.93□□□□□ -0.34
BCL3P20749 VDAC1P7-201ENST00000462417 847 ntBASIC12.93□□□□□ -0.34
BCL3P20749 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.93□□□□□ -0.34
BCL3P20749 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 AC005498.2-205ENST00000593218 784 ntBASIC12.93□□□□□ -0.34
BCL3P20749 AC006538.3-201ENST00000612495 578 ntBASIC12.93□□□□□ -0.34
BCL3P20749 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
BCL3P20749 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
BCL3P20749 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BCL3P20749 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.93□□□□□ -0.34
BCL3P20749 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms