Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC130P13994 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC130P13994 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC130P13994 AP000812.2-201ENST00000538934 718 ntBASIC16.06■□□□□ 0.16
CCDC130P13994 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 AL008721.1-201ENST00000609964 604 ntBASIC16.06■□□□□ 0.16
CCDC130P13994 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC130P13994 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC130P13994 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC130P13994 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC130P13994 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCDC130P13994 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC130P13994 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC130P13994 CNN2P8-201ENST00000421872 913 ntBASIC16.05■□□□□ 0.16
CCDC130P13994 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 RN7SL48P-201ENST00000579283 293 ntBASIC16.05■□□□□ 0.16
CCDC130P13994 ENPP7P14-201ENST00000621765 1040 ntBASIC16.05■□□□□ 0.16
CCDC130P13994 COX11-210ENST00000639671 696 ntBASIC16.05■□□□□ 0.16
CCDC130P13994 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC130P13994 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC130P13994 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC130P13994 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC130P13994 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC130P13994 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC130P13994 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCDC130P13994 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC130P13994 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC130P13994 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC130P13994 KRT223P-202ENST00000449164 1292 ntBASIC16.04■□□□□ 0.16
CCDC130P13994 FO681548.1-201ENST00000455617 1132 ntBASIC16.04■□□□□ 0.16
CCDC130P13994 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms