Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DOBP13765 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 LINC00552-201ENST00000625151 2579 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
HLA-DOBP13765 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DOBP13765 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AL137783.1-201ENST00000623494 1896 ntBASIC13.63□□□□□ -0.23
HLA-DOBP13765 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 PIN1P1-201ENST00000412108 996 ntBASIC13.63□□□□□ -0.23
HLA-DOBP13765 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AP001582.1-201ENST00000525856 295 ntBASIC13.63□□□□□ -0.23
HLA-DOBP13765 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AC097376.2-205ENST00000610159 5334 ntBASIC13.63□□□□□ -0.23
HLA-DOBP13765 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DOBP13765 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DOBP13765 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 TERF1P3-201ENST00000505638 1227 ntBASIC13.62□□□□□ -0.23
HLA-DOBP13765 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 BX539320.1-201ENST00000623759 877 ntBASIC13.62□□□□□ -0.23
HLA-DOBP13765 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DOBP13765 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HLA-DOBP13765 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms