Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 RPL5P21-201ENST00000404620 815 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 AL031284.1-201ENST00000419297 478 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 PHKG1P2-201ENST00000457537 863 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 EMBP1-201ENST00000458200 901 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AC061975.2-201ENST00000581722 295 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AC012313.10-201ENST00000623509 926 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 AC004877.2-201ENST00000623941 599 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 KRT8P37-201ENST00000451609 1420 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 ZBED1P1-201ENST00000502364 1930 ntBASIC11.4□□□□□ -0.58
SMIM17P0DL12 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.4□□□□□ -0.58
SMIM17P0DL12 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM17P0DL12 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
SMIM17P0DL12 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM17P0DL12 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 AC004870.1-201ENST00000315132 882 ntBASIC11.39□□□□□ -0.59
SMIM17P0DL12 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MIR1224-201ENST00000408193 85 ntBASIC11.39□□□□□ -0.59
SMIM17P0DL12 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 FAM8A3P-201ENST00000427218 844 ntBASIC11.39□□□□□ -0.59
SMIM17P0DL12 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RNA5SP415-201ENST00000517246 115 ntBASIC11.39□□□□□ -0.59
SMIM17P0DL12 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM17P0DL12 RARRES2P8-201ENST00000566335 367 ntBASIC11.39□□□□□ -0.59
SMIM17P0DL12 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms