Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 TIMM8BP1-201ENST00000452384 211 ntBASIC11.6□□□□□ -0.55
TCRAP04437 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.6□□□□□ -0.55
TCRAP04437 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.6□□□□□ -0.55
TCRAP04437 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.6□□□□□ -0.55
TCRAP04437 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 BANF1P1-201ENST00000553684 263 ntBASIC11.6□□□□□ -0.55
TCRAP04437 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TCRAP04437 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.59□□□□□ -0.55
TCRAP04437 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 AC074338.1-201ENST00000416825 156 ntBASIC11.59□□□□□ -0.55
TCRAP04437 RPL13AP23-201ENST00000480739 586 ntBASIC11.59□□□□□ -0.55
TCRAP04437 AC069335.1-201ENST00000489972 472 ntBASIC11.59□□□□□ -0.55
TCRAP04437 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.59□□□□□ -0.55
TCRAP04437 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.59□□□□□ -0.55
TCRAP04437 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TCRAP04437 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.59□□□□□ -0.55
TCRAP04437 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TCRAP04437 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
TCRAP04437 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
TCRAP04437 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
TCRAP04437 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 KRT8P12-202ENST00000472924 1397 ntBASIC11.58□□□□□ -0.56
TCRAP04437 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TCRAP04437 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.58□□□□□ -0.56
TCRAP04437 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.58□□□□□ -0.56
TCRAP04437 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.58□□□□□ -0.56
TCRAP04437 AL591424.1-201ENST00000442569 1213 ntBASIC11.58□□□□□ -0.56
TCRAP04437 AL592309.1-201ENST00000443127 649 ntBASIC11.58□□□□□ -0.56
TCRAP04437 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms