Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC9.12□□□□□ -0.95
APOBP04114 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 AD000864.1-201ENST00000624076 2295 ntBASIC9.12□□□□□ -0.95
APOBP04114 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 AC019109.1-201ENST00000401725 1874 ntBASIC9.12□□□□□ -0.95
APOBP04114 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 FUCA1P1-201ENST00000374476 1351 ntBASIC9.12□□□□□ -0.95
APOBP04114 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
APOBP04114 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 VPS18-202ENST00000558474 873 ntTSL 3 BASIC9.12□□□□□ -0.95
APOBP04114 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC9.12□□□□□ -0.95
APOBP04114 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 RN7SL564P-201ENST00000496309 250 ntBASIC9.12□□□□□ -0.95
APOBP04114 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 MIR4472-1-201ENST00000584349 80 ntBASIC9.12□□□□□ -0.95
APOBP04114 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC9.12□□□□□ -0.95
APOBP04114 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 RPS18P9-201ENST00000482817 460 ntBASIC9.11□□□□□ -0.95
APOBP04114 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC9.11□□□□□ -0.95
APOBP04114 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC9.11□□□□□ -0.95
APOBP04114 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC9.11□□□□□ -0.95
APOBP04114 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 RARS-210ENST00000626454 177 ntTSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
APOBP04114 NQO2-204ENST00000380454 851 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC9.11□□□□□ -0.95
APOBP04114 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
APOBP04114 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC9.11□□□□□ -0.95
APOBP04114 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
APOBP04114 DUX4L50-201ENST00000455245 715 ntBASIC9.11□□□□□ -0.95
APOBP04114 IGKV1OR-2-201ENST00000457995 350 ntBASIC9.11□□□□□ -0.95
APOBP04114 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC9.11□□□□□ -0.95
APOBP04114 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms