Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.46□□□□□ -0.57
LTAP01374 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LTAP01374 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.46□□□□□ -0.57
LTAP01374 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
LTAP01374 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.46□□□□□ -0.57
LTAP01374 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LTAP01374 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.46□□□□□ -0.57
LTAP01374 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.46□□□□□ -0.57
LTAP01374 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.46□□□□□ -0.57
LTAP01374 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.57
LTAP01374 AC079140.1-201ENST00000508039 487 ntBASIC11.46□□□□□ -0.57
LTAP01374 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.46□□□□□ -0.57
LTAP01374 SLC25A39P2-201ENST00000537614 270 ntBASIC11.46□□□□□ -0.57
LTAP01374 BANF1P1-201ENST00000553684 263 ntBASIC11.46□□□□□ -0.57
LTAP01374 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.46□□□□□ -0.57
LTAP01374 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
LTAP01374 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.46□□□□□ -0.57
LTAP01374 AC026120.1-201ENST00000611536 926 ntBASIC11.46□□□□□ -0.57
LTAP01374 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LTAP01374 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LTAP01374 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.46□□□□□ -0.58
LTAP01374 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
LTAP01374 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LTAP01374 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
LTAP01374 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 AC090505.1-201ENST00000430515 1834 ntBASIC11.46□□□□□ -0.58
LTAP01374 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 AC130686.1-201ENST00000622936 2466 ntBASIC11.46□□□□□ -0.58
LTAP01374 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 AC105206.1-202ENST00000314927 2368 ntBASIC11.46□□□□□ -0.58
LTAP01374 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.46□□□□□ -0.58
LTAP01374 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LTAP01374 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
LTAP01374 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.45□□□□□ -0.58
LTAP01374 AC015818.8-201ENST00000587907 1519 ntBASIC11.45□□□□□ -0.58
LTAP01374 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 CICP8-201ENST00000455800 2813 ntBASIC11.45□□□□□ -0.58
LTAP01374 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.45□□□□□ -0.58
LTAP01374 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 FAAHP1-202ENST00000446499 1238 ntBASIC11.45□□□□□ -0.58
LTAP01374 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.45□□□□□ -0.58
LTAP01374 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.45□□□□□ -0.58
LTAP01374 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 UXT-AS1-201ENST00000590504 1525 ntBASIC11.45□□□□□ -0.58
LTAP01374 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LTAP01374 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.45□□□□□ -0.58
LTAP01374 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LTAP01374 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.44□□□□□ -0.58
LTAP01374 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LTAP01374 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LTAP01374 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LTAP01374 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LTAP01374 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
LTAP01374 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms