Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.61■□□□□ 0.09
TOP3BO95985 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
TOP3BO95985 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.61■□□□□ 0.09
TOP3BO95985 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.61■□□□□ 0.09
TOP3BO95985 IGHJ2P-201ENST00000454480 60 ntBASIC15.61■□□□□ 0.09
TOP3BO95985 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.61■□□□□ 0.09
TOP3BO95985 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TOP3BO95985 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TOP3BO95985 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TOP3BO95985 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.61■□□□□ 0.09
TOP3BO95985 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.6■□□□□ 0.09
TOP3BO95985 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TOP3BO95985 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 BCRP2-202ENST00000447763 634 ntBASIC15.6■□□□□ 0.09
TOP3BO95985 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.6■□□□□ 0.09
TOP3BO95985 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.6■□□□□ 0.09
TOP3BO95985 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 BCRP6-201ENST00000510112 632 ntBASIC15.6■□□□□ 0.09
TOP3BO95985 BCRP7-201ENST00000511549 544 ntBASIC15.6■□□□□ 0.09
TOP3BO95985 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.6■□□□□ 0.09
TOP3BO95985 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.6■□□□□ 0.09
TOP3BO95985 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.6■□□□□ 0.09
TOP3BO95985 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.6■□□□□ 0.09
TOP3BO95985 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.6■□□□□ 0.09
TOP3BO95985 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TOP3BO95985 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TOP3BO95985 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.59■□□□□ 0.09
TOP3BO95985 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.59■□□□□ 0.09
TOP3BO95985 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.59■□□□□ 0.09
TOP3BO95985 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TOP3BO95985 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TOP3BO95985 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TOP3BO95985 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.59■□□□□ 0.09
TOP3BO95985 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.59■□□□□ 0.09
TOP3BO95985 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TOP3BO95985 SLC25A24P2-201ENST00000415059 510 ntBASIC15.59■□□□□ 0.09
TOP3BO95985 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms