Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.16■□□□□ 0.66
ABCC4O15439 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ABCC4O15439 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ABCC4O15439 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCC4O15439 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCC4O15439 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 AL390755.1-201ENST00000623716 2027 ntBASIC19.15■□□□□ 0.66
ABCC4O15439 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ABCC4O15439 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ABCC4O15439 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCC4O15439 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.15■□□□□ 0.66
ABCC4O15439 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.15■□□□□ 0.66
ABCC4O15439 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ABCC4O15439 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
ABCC4O15439 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.14■□□□□ 0.66
ABCC4O15439 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
ABCC4O15439 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.14■□□□□ 0.66
ABCC4O15439 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ABCC4O15439 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ABCC4O15439 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.14■□□□□ 0.65
ABCC4O15439 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 CD8B2-202ENST00000417670 633 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 POM121L8P-201ENST00000417732 1281 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.14■□□□□ 0.65
ABCC4O15439 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 POM121L9P-203ENST00000441984 1285 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 IGHJ2P-201ENST00000454480 60 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.14■□□□□ 0.65
ABCC4O15439 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
ABCC4O15439 AP006547.1-201ENST00000563435 692 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.14■□□□□ 0.65
ABCC4O15439 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.14■□□□□ 0.65
ABCC4O15439 AC018529.2-202ENST00000611482 3087 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 AL096828.3-201ENST00000615354 462 ntBASIC19.14■□□□□ 0.65
ABCC4O15439 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.14■□□□□ 0.65
ABCC4O15439 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.14■□□□□ 0.65
ABCC4O15439 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ABCC4O15439 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.14■□□□□ 0.65
ABCC4O15439 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ABCC4O15439 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.13■□□□□ 0.65
ABCC4O15439 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.13■□□□□ 0.65
ABCC4O15439 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ABCC4O15439 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ABCC4O15439 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
ABCC4O15439 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ABCC4O15439 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms