Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 CNN2P2-201ENST00000443536 909 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 CNN2P3-201ENST00000450201 906 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 HLA-J-203ENST00000494367 1087 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC000095.1-201ENST00000603208 874 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AL136317.3-201ENST00000618497 906 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC004461.2-201ENST00000629517 803 ntBASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00959A0A1B0GUT2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TUBB3P1-201ENST00000405796 1332 ntBASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AP006288.1-201ENST00000446065 395 ntBASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AC069120.2-201ENST00000524091 540 ntBASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00959A0A1B0GUT2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms