Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.09□□□□□ -0.63
TRGV1A0A0A0MS02 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
TRGV1A0A0A0MS02 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
TRGV1A0A0A0MS02 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 ZBED1P1-201ENST00000502364 1930 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 GHSR-202ENST00000427970 912 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 SPDYE18-201ENST00000510091 1050 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 DOC2GP-202ENST00000514950 1163 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AC005498.2-205ENST00000593218 784 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AL390955.2-201ENST00000603032 514 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 AC004840.1-201ENST00000636359 365 ntBASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV1A0A0A0MS02 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AC012508.2-201ENST00000567613 1472 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AL589987.1-201ENST00000453380 819 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 CYMP-203ENST00000474680 1263 ntBASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV1A0A0A0MS02 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms