Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 GHSR-202ENST00000427970 912 ntBASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 DUX4L27-201ENST00000554796 1261 ntBASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AL844908.2-201ENST00000609461 460 ntBASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 AL590560.3-201ENST00000623350 461 ntBASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 REXO1L1P-201ENST00000379010 6598 ntBASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.65□□□□□ -0.22
POLR1DQ9Y2S0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
POLR1DQ9Y2S0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
POLR1DQ9Y2S0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms