Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPH3ALQ9UNE2 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 PCDHA5-203ENST00000614258 4248 ntBASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 AL049840.3-201ENST00000602669 611 ntBASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
RPH3ALQ9UNE2 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 CICP11-201ENST00000434745 2827 ntBASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RPH3ALQ9UNE2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms