Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIN7CQ9NUP9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC015910.1-201ENST00000579400 975 ntBASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AL590560.3-201ENST00000623350 461 ntBASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 AL033527.5-202ENST00000641632 1098 ntBASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LIN7CQ9NUP9 PEG13-201ENST00000631594 5667 ntBASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AP000845.1-201ENST00000581677 2131 ntBASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.68□□□□□ -0.38
LIN7CQ9NUP9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms