Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM7Q9NR12 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AC055811.4-201ENST00000624039 1754 ntBASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AC116345.2-201ENST00000512837 523 ntBASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 AC004899.1-201ENST00000424687 1714 ntBASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDLIM7Q9NR12 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PDIA3P2-201ENST00000428073 158 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 NOC2LP1-201ENST00000450578 752 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PGAM1P5-201ENST00000548011 764 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AC012044.1-201ENST00000603431 297 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AC068587.8-201ENST00000641239 219 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 AL157791.1-201ENST00000553667 1699 ntBASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.78■□□□□ 0.28
PDLIM7Q9NR12 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.77■□□□□ 0.28
PDLIM7Q9NR12 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM7Q9NR12 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDLIM7Q9NR12 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms