Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 CNN2P11-201ENST00000429351 262 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 CNN2P2-201ENST00000443536 909 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 CNN2P3-201ENST00000450201 906 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 ZNF890P-202ENST00000530367 1156 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.87□□□□□ -0.51
TRGV9Q99603 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 AL136317.3-201ENST00000618497 906 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
TRGV9Q99603 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC097359.2-201ENST00000604992 2389 ntBASIC11.86□□□□□ -0.51
TRGV9Q99603 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRGV9Q99603 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.86□□□□□ -0.51
TRGV9Q99603 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV9Q99603 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TRGV9Q99603 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.86□□□□□ -0.51
TRGV9Q99603 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
TRGV9Q99603 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV9Q99603 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV9Q99603 AC152010.1-201ENST00000415779 2006 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms