Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 RPS9P1-201ENST00000419943 583 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 XBP1P1-201ENST00000436573 652 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 LINC01783-202ENST00000614408 828 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 BX284668.2-205ENST00000619677 828 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CRAMP1Q96RY5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AL592076.1-201ENST00000424448 303 ntBASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 RPL7P35-201ENST00000446943 740 ntBASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AP002803.1-201ENST00000528836 498 ntBASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 MIR3188-201ENST00000583494 85 ntBASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CRAMP1Q96RY5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 LINC01165-201ENST00000445190 1623 ntBASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 HLA-C-210ENST00000640219 976 ntBASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.25■□□□□ 0.51
CRAMP1Q96RY5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms