Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 DUX4L46-201ENST00000566845 751 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC100757.4-201ENST00000626934 759 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC068587.8-201ENST00000641239 219 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AL138725.1-201ENST00000407347 1314 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC008132.1-202ENST00000342005 1389 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 LILRP1-201ENST00000444199 1370 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 KRT8P19-201ENST00000551916 1455 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 AC087481.3-201ENST00000602886 1894 ntBASIC14.04□□□□□ -0.16
CT55Q8WUE5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CT55Q8WUE5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.04□□□□□ -0.16
CT55Q8WUE5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.03□□□□□ -0.16
CT55Q8WUE5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 FGFR3P5-201ENST00000564496 886 ntBASIC14.03□□□□□ -0.16
CT55Q8WUE5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AC005324.6-201ENST00000587972 613 ntBASIC14.03□□□□□ -0.16
CT55Q8WUE5 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AL805961.1-203ENST00000641078 1258 ntBASIC14.03□□□□□ -0.16
CT55Q8WUE5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
CT55Q8WUE5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.03□□□□□ -0.16
CT55Q8WUE5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CT55Q8WUE5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CT55Q8WUE5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CT55Q8WUE5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.02□□□□□ -0.16
CT55Q8WUE5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CT55Q8WUE5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CT55Q8WUE5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CT55Q8WUE5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CT55Q8WUE5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.02□□□□□ -0.16
CT55Q8WUE5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CT55Q8WUE5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
CT55Q8WUE5 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CT55Q8WUE5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 RPL18P13-201ENST00000478088 569 ntBASIC14.02□□□□□ -0.17
CT55Q8WUE5 MARK2P5-201ENST00000507649 634 ntBASIC14.02□□□□□ -0.17
CT55Q8WUE5 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 AC024681.1-201ENST00000521917 487 ntBASIC14.02□□□□□ -0.17
CT55Q8WUE5 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.02□□□□□ -0.17
CT55Q8WUE5 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms