Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AL023775.1-201ENST00000454907 1746 ntBASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 AC009090.5-201ENST00000624886 2285 ntBASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SHKBP1Q8TBC3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC018735.1-201ENST00000437208 1502 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 POM121L8P-201ENST00000417732 1281 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 POM121L9P-203ENST00000441984 1285 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms