Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 HLA-H-201ENST00000383620 1096 ntBASIC15.08■□□□□ 0
RFWD2Q8NHY2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 FAM58CP-201ENST00000435741 640 ntBASIC15.08■□□□□ 0
RFWD2Q8NHY2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 AL135744.1-201ENST00000565098 629 ntBASIC15.08■□□□□ 0
RFWD2Q8NHY2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 AC026979.3-201ENST00000607315 403 ntBASIC15.08■□□□□ 0
RFWD2Q8NHY2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.08■□□□□ 0
RFWD2Q8NHY2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RFWD2Q8NHY2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC007787.1-201ENST00000588095 1583 ntBASIC15.07■□□□□ 0
RFWD2Q8NHY2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC055811.4-201ENST00000624039 1754 ntBASIC15.07■□□□□ 0
RFWD2Q8NHY2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC091812.2-201ENST00000619081 385 ntBASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC099521.3-201ENST00000624251 2938 ntBASIC15.07■□□□□ 0
RFWD2Q8NHY2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 AL359183.1-201ENST00000623796 2132 ntBASIC15.07■□□□□ 0
RFWD2Q8NHY2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RFWD2Q8NHY2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.07■□□□□ 0
RFWD2Q8NHY2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.06■□□□□ 0
RFWD2Q8NHY2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.06■□□□□ 0
RFWD2Q8NHY2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RFWD2Q8NHY2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFWD2Q8NHY2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.06■□□□□ 0
RFWD2Q8NHY2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.06■□□□□ 0
RFWD2Q8NHY2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms