Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 FAM8A3P-201ENST00000427218 844 ntBASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AC092183.1-201ENST00000469884 875 ntBASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 RFPL4AP1-201ENST00000530883 850 ntBASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AC135586.1-201ENST00000539323 574 ntBASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 MRPS18AP1-201ENST00000414458 589 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AC005498.2-205ENST00000593218 784 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AC004790.1-201ENST00000612686 536 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SNX18-202ENST00000343017 3140 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AP000845.1-201ENST00000581677 2131 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF439Q8NDP4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.65□□□□□ -0.39
ZNF439Q8NDP4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.65□□□□□ -0.39
ZNF439Q8NDP4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.65□□□□□ -0.39
ZNF439Q8NDP4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms