Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 ACTBP11-201ENST00000436287 1126 ntBASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.5■□□□□ 0.07
KDM1BQ8NB78 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.5■□□□□ 0.07
KDM1BQ8NB78 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AC023908.3-201ENST00000564211 3047 ntBASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 TPM3P8-201ENST00000330554 643 ntBASIC15.49■□□□□ 0.07
KDM1BQ8NB78 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 AC010328.2-201ENST00000597698 1111 ntBASIC15.49■□□□□ 0.07
KDM1BQ8NB78 ENPP7P14-201ENST00000621765 1040 ntBASIC15.49■□□□□ 0.07
KDM1BQ8NB78 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KDM1BQ8NB78 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 REXO1L6P-201ENST00000603433 1515 ntBASIC15.48■□□□□ 0.07
KDM1BQ8NB78 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.48■□□□□ 0.07
KDM1BQ8NB78 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms