Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 AC244669.2-201ENST00000612320 853 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 ENPP7P14-201ENST00000621765 1040 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 LINC01101-201ENST00000622953 1884 ntBASIC13.4□□□□□ -0.26
ZIC4Q8N9L1 CICP23-201ENST00000605013 2741 ntBASIC13.4□□□□□ -0.27
ZIC4Q8N9L1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC112492.5-201ENST00000421897 457 ntBASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC245100.3-201ENST00000441281 285 ntBASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 KRT17P8-201ENST00000540749 863 ntBASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 AC018442.1-201ENST00000421439 2061 ntBASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZIC4Q8N9L1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 CNN2P8-201ENST00000421872 913 ntBASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 KRT43P-201ENST00000434019 910 ntBASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 AL512343.1-201ENST00000605837 169 ntBASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.38□□□□□ -0.27
ZIC4Q8N9L1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms