Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COMMD1Q8N668 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COMMD1Q8N668 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COMMD1Q8N668 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COMMD1Q8N668 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COMMD1Q8N668 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.72□□□□□ -0.37
COMMD1Q8N668 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
COMMD1Q8N668 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COMMD1Q8N668 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 TREML5P-201ENST00000421694 576 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 AC241585.1-201ENST00000433527 519 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AC245100.5-201ENST00000452108 331 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AC105021.1-202ENST00000570572 669 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 AC005498.2-205ENST00000593218 784 ntBASIC12.71□□□□□ -0.37
COMMD1Q8N668 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.71□□□□□ -0.37
COMMD1Q8N668 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
COMMD1Q8N668 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.71□□□□□ -0.38
COMMD1Q8N668 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms