Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 SERBP1P3-201ENST00000459980 809 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 RN7SL837P-201ENST00000463010 287 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC243562.2-201ENST00000561247 970 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AL512343.1-201ENST00000605837 169 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AL033527.4-201ENST00000641026 673 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 SLC7A15P-201ENST00000424028 1363 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 AC023908.3-201ENST00000564211 3047 ntBASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.41□□□□□ -0.26
CHRFAM7AQ494W8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 AC026748.1-201ENST00000624349 3251 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 AC092552.1-201ENST00000547243 906 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 COX11-210ENST00000639671 696 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 KRT8P44-201ENST00000441609 1350 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRFAM7AQ494W8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHRFAM7AQ494W8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRFAM7AQ494W8 AC009090.5-201ENST00000624886 2285 ntBASIC13.39□□□□□ -0.27
CHRFAM7AQ494W8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHRFAM7AQ494W8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRFAM7AQ494W8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CHRFAM7AQ494W8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms