Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SCARNA21-201ENST00000517026 139 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC242376.1-201ENST00000559033 726 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC006453.1-201ENST00000636037 1257 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC003102.2-201ENST00000589195 1469 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AL008718.2-201ENST00000609206 1313 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 AC092850.2-201ENST00000623821 2697 ntBASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM71Q2Q1W2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM71Q2Q1W2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AC012441.2-201ENST00000444843 739 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AC073150.1-201ENST00000450406 1084 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AL353637.1-201ENST00000451571 732 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 LDHBP1-201ENST00000455730 1119 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 MIR4754-201ENST00000582477 89 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AC008805.1-201ENST00000590892 364 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 AL353726.2-201ENST00000623259 884 ntBASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM71Q2Q1W2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 RTN3P1-201ENST00000536295 711 ntBASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM71Q2Q1W2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms