Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD47Q08722 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CD47Q08722 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.19□□□□□ -0.14
CD47Q08722 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CD47Q08722 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.18□□□□□ -0.14
CD47Q08722 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.18□□□□□ -0.14
CD47Q08722 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 EEF1DP4-201ENST00000446006 880 ntBASIC14.18□□□□□ -0.14
CD47Q08722 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 AC023141.5-201ENST00000458585 616 ntBASIC14.18□□□□□ -0.14
CD47Q08722 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 AC093520.2-201ENST00000561830 333 ntBASIC14.18□□□□□ -0.14
CD47Q08722 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.18□□□□□ -0.14
CD47Q08722 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CD47Q08722 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CD47Q08722 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CD47Q08722 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 DGCR9-201ENST00000609630 2415 ntBASIC14.17□□□□□ -0.14
CD47Q08722 AL607033.1-201ENST00000623900 1599 ntBASIC14.17□□□□□ -0.14
CD47Q08722 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.17□□□□□ -0.14
CD47Q08722 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.17□□□□□ -0.14
CD47Q08722 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.17□□□□□ -0.14
CD47Q08722 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.17□□□□□ -0.14
CD47Q08722 MIR6080-201ENST00000617359 66 ntBASIC14.17□□□□□ -0.14
CD47Q08722 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.17□□□□□ -0.14
CD47Q08722 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD47Q08722 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms