Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 AL354718.3-201ENST00000616414 581 ntBASIC17.44■□□□□ 0.38
CHMP4BP1P59074 CR382287.1-201ENST00000623954 586 ntBASIC17.44■□□□□ 0.38
CHMP4BP1P59074 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP4BP1P59074 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.43■□□□□ 0.38
CHMP4BP1P59074 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AC026954.1-201ENST00000429771 1293 ntBASIC17.43■□□□□ 0.38
CHMP4BP1P59074 YBX1P6-201ENST00000442962 1002 ntBASIC17.43■□□□□ 0.38
CHMP4BP1P59074 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AC107373.2-201ENST00000607735 490 ntBASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AC026748.1-201ENST00000624349 3251 ntBASIC17.43■□□□□ 0.38
CHMP4BP1P59074 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP4BP1P59074 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 KRT8P44-201ENST00000441609 1350 ntBASIC17.42■□□□□ 0.38
CHMP4BP1P59074 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 FO681548.1-201ENST00000455617 1132 ntBASIC17.42■□□□□ 0.38
CHMP4BP1P59074 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.42■□□□□ 0.38
CHMP4BP1P59074 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP4BP1P59074 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms