Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CLDN12P56749 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CLDN12P56749 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CLDN12P56749 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.27□□□□□ -0.28
CLDN12P56749 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CLDN12P56749 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.27□□□□□ -0.28
CLDN12P56749 MST1P2-201ENST00000457982 2291 ntBASIC13.27□□□□□ -0.28
CLDN12P56749 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLDN12P56749 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CLDN12P56749 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN12P56749 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 TIMM8BP1-201ENST00000452384 211 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 AC009078.2-202ENST00000463353 338 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 AL662844.1-201ENST00000546340 181 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.27□□□□□ -0.29
CLDN12P56749 BANF1P1-201ENST00000553684 263 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.27□□□□□ -0.29
CLDN12P56749 AC011474.4-201ENST00000623523 2076 ntBASIC13.27□□□□□ -0.29
CLDN12P56749 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.27□□□□□ -0.29
CLDN12P56749 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLDN12P56749 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
CLDN12P56749 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLDN12P56749 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDN12P56749 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN12P56749 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 RNA5SP416-201ENST00000516838 111 ntBASIC13.26□□□□□ -0.29
CLDN12P56749 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CLDN12P56749 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
CLDN12P56749 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.26□□□□□ -0.29
CLDN12P56749 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN12P56749 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.26□□□□□ -0.29
CLDN12P56749 KRT8P23-201ENST00000560090 1207 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms