Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH11P55287 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14□□□□□ -0.17
CDH11P55287 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14□□□□□ -0.17
CDH11P55287 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH11P55287 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14□□□□□ -0.17
CDH11P55287 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH11P55287 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 RPL37AP1-201ENST00000412502 279 ntBASIC14□□□□□ -0.17
CDH11P55287 MRPS18AP1-201ENST00000414458 589 ntBASIC14□□□□□ -0.17
CDH11P55287 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14□□□□□ -0.17
CDH11P55287 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14□□□□□ -0.17
CDH11P55287 AL079307.3-201ENST00000556114 283 ntBASIC14□□□□□ -0.17
CDH11P55287 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CDH11P55287 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14□□□□□ -0.17
CDH11P55287 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14□□□□□ -0.17
CDH11P55287 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CDH11P55287 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14□□□□□ -0.17
CDH11P55287 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH11P55287 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
CDH11P55287 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH11P55287 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH11P55287 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CDH11P55287 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 AC087499.5-201ENST00000452760 1342 ntBASIC13.99□□□□□ -0.17
CDH11P55287 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 AL080243.2-201ENST00000418783 582 ntBASIC13.99□□□□□ -0.17
CDH11P55287 AC015922.1-201ENST00000421102 1152 ntBASIC13.99□□□□□ -0.17
CDH11P55287 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH11P55287 RN7SL618P-201ENST00000477850 296 ntBASIC13.99□□□□□ -0.17
CDH11P55287 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH11P55287 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH11P55287 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH11P55287 AC239800.4-201ENST00000603712 296 ntBASIC13.99□□□□□ -0.17
CDH11P55287 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH11P55287 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH11P55287 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms