Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.51□□□□□ -0.09
NR1H2P55055 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.51□□□□□ -0.09
NR1H2P55055 SPDYE7P-202ENST00000420373 878 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 SPCS2P4-201ENST00000436160 681 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 BCRP1-201ENST00000444246 691 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.51□□□□□ -0.09
NR1H2P55055 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.51□□□□□ -0.09
NR1H2P55055 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 Z92544.3-201ENST00000624747 417 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.51□□□□□ -0.09
NR1H2P55055 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.51□□□□□ -0.09
NR1H2P55055 ACE3P-201ENST00000423435 1973 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 UXT-AS1-201ENST00000590504 1525 ntBASIC14.51□□□□□ -0.09
NR1H2P55055 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NR1H2P55055 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NR1H2P55055 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NR1H2P55055 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.5□□□□□ -0.09
NR1H2P55055 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.5□□□□□ -0.09
NR1H2P55055 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 AL096865.1-201ENST00000606796 927 ntBASIC14.5□□□□□ -0.09
NR1H2P55055 AC021097.1-201ENST00000607902 574 ntBASIC14.5□□□□□ -0.09
NR1H2P55055 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.5□□□□□ -0.09
NR1H2P55055 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NR1H2P55055 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR1H2P55055 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.5□□□□□ -0.09
NR1H2P55055 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NR1H2P55055 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H2P55055 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H2P55055 AL591122.2-201ENST00000624125 1853 ntBASIC14.49□□□□□ -0.09
NR1H2P55055 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms